The Rectors who have been in-charge of the Jesuit House have been the men who developed St. Paul’s, behind the curtains. They are men of great Character who overlooked the happenings of the school.
| Rectors, over the Years | |||
| Years | Jesuit In-Charge | Years | Jesuit In-Charge |
| 1890 – 1914 | Fr. Joseph Gonsalves SJ | 1961 – 1968 | Fr. Vincent D’Souza SJ |
| 1915 – 1921 | Fr. Joseph Dias SJ | 1968 – 1973 | Fr. Walter D’Souza SJ |
| 1922 – 1928 | Fr. Joachim Lima SJ | 1973 – 1976 | Fr. Mathew Almeida SJ |
| 1929 – 1935 | Fr. Joseph Dias SJ | 1976 – 1981 | Fr. Agnelo Pinto SJ |
| 1936 – 1939 | Fr. Peter do Rosario SJ | 1981 – 1986 | Fr. Vincent D’Souza SJ |
| 1940 – 1941 | Fr. Joseph Dias SJ | 1986 – 1992 | Fr. Joseph Chenakala SJ |
| 1942 | Fr. Joachim Abranches SJ | 1992 – 1998 | Fr. Joaquim de Mello SJ |
| 1943 – 1948 | Fr. John A de Miranda SJ | 1998 – 2004 | Fr. Edwin D’Souza SJ |
| 1949 – 1951 | Fr. Walter Mathias SJ | 2004 – 2010 | Fr. Hector Almeida SJ |
| 1952 – 1954 | Fr. Aloysius D’Cruz SJ | 2010 – 2017 | Fr. Alban D’Souza SJ |
| 1955 – 1957 | Fr. John A de Miranda SJ | 2017 – 2023 | Fr. Ronald D’Souza SJ |
| 1957 – 1961 | Fr. George D’Sa SJ | 2023 Onwards | Fr. Simon Fernandes SJ |
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| Fr. Joseph Gonsalves SJ | Fr. Joseph Dias SJ |
| 1890 – 1914 | 1915 – 1921; 1929 – 1935; 1940 – 1941 |
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| Fr. Joachim Lima SJ | Fr. Peter do Rosario SJ |
| 1922 – 1928 | 1936 – 1939 |
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| Fr. J Abranches SJ | Fr. John A de Miranda SJ |
| 1942 | 1943 – 1948; 1955 – 1957 |
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| Fr. Walter Mathias SJ | Fr. Aloysius D’Cruz SJ |
| 1949 – 1951 | 1952 – 1954 |
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| Fr. George D’Sa SJ | Fr. Vincent D’Souza SJ |
| 1957 – 1961 | 1961 – 1968; 1981 – 1986 |
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| Fr. Walter D’Souza SJ | Fr. Mathew Almeida SJ |
| 1968 – 1973 | 1973 – 1976 |
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| Fr. Agnelo Pinto SJ | Fr. Joseph Chenakala SJ |
| 1976 – 1981 | 1986 – 1992 |
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| Fr. Joaquim de Mello SJ | Fr. Edwin D’Souza SJ |
| 1992 – 1998 | 1998 – 2004 |
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| Fr. Hector Almeida SJ | Fr. Alban D’Souza SJ |
| 2004 – 2010 | 2010 – 2017 |
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| Fr. Ronald D’Souza SJ | Fr. Simon Fernandes SJ |
| 2017 – 2023 | 2023 Onwards |